Index of /sims/capiti/detectors/databases_seqscreen/software/hmmer-3.4/src

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]Makefile2026-05-07 16:02 9.9K 
[ ]Makefile.in2026-05-07 16:02 9.9K 
[ ]alimask2026-05-07 15:56 448K 
[TXT]alimask.c2026-05-07 16:02 25K 
[ ]alimask.o2026-05-07 16:02 26K 
[TXT]build.c2026-05-07 16:02 24K 
[ ]build.o2026-05-07 16:02 7.6K 
[ ]build_utest2026-05-07 15:56 563K 
[TXT]cachedb.c2026-05-07 16:02 18K 
[TXT]cachedb.h2026-05-07 16:02 1.9K 
[ ]cachedb.o2026-05-07 16:02 8.7K 
[TXT]cachedb_shard.c2026-05-07 16:02 30K 
[TXT]cachedb_shard.h2026-05-07 16:02 322  
[ ]cachedb_shard.o2026-05-07 16:02 16K 
[TXT]emit.c2026-05-07 16:02 22K 
[ ]emit.o2026-05-07 16:02 9.1K 
[TXT]errors.c2026-05-07 16:02 1.4K 
[ ]errors.o2026-05-07 16:02 2.5K 
[TXT]evalues.c2026-05-07 16:02 27K 
[ ]evalues.o2026-05-07 16:02 11K 
[TXT]eweight.c2026-05-07 16:02 5.5K 
[ ]eweight.o2026-05-07 16:02 4.3K 
[TXT]fm_alphabet.c2026-05-07 16:02 4.7K 
[ ]fm_alphabet.o2026-05-07 16:02 3.9K 
[TXT]fm_general.c2026-05-07 16:02 25K 
[ ]fm_general.o2026-05-07 16:02 16K 
[TXT]fm_sse.c2026-05-07 16:02 25K 
[ ]fm_sse.o2026-05-07 16:02 23K 
[TXT]fm_ssv.c2026-05-07 16:02 33K 
[ ]fm_ssv.o2026-05-07 16:02 25K 
[TXT]generic_decoding.c2026-05-07 16:02 19K 
[ ]generic_decoding.o2026-05-07 16:02 3.6K 
[TXT]generic_fwdback.c2026-05-07 16:02 31K 
[ ]generic_fwdback.o2026-05-07 16:02 6.6K 
[TXT]generic_fwdback_banded.c2026-05-07 16:02 9.4K 
[ ]generic_fwdback_banded.o2026-05-07 16:02 3.5K 
[TXT]generic_fwdback_chk.c2026-05-07 16:02 32K 
[ ]generic_fwdback_chk.o2026-05-07 16:02 16K 
[ ]generic_fwdback_chk_utest2026-05-07 15:56 293K 
[TXT]generic_fwdback_rescaled.c2026-05-07 16:02 23K 
[ ]generic_fwdback_utest2026-05-07 15:56 301K 
[TXT]generic_msv.c2026-05-07 16:02 22K 
[ ]generic_msv.o2026-05-07 16:02 4.5K 
[ ]generic_msv_utest2026-05-07 15:56 246K 
[TXT]generic_null2.c2026-05-07 16:02 16K 
[ ]generic_null2.o2026-05-07 16:02 5.5K 
[TXT]generic_optacc.c2026-05-07 16:02 23K 
[ ]generic_optacc.o2026-05-07 16:02 14K 
[TXT]generic_stotrace.c2026-05-07 16:02 19K 
[ ]generic_stotrace.o2026-05-07 16:02 6.8K 
[ ]generic_stotrace_utest2026-05-07 15:56 301K 
[TXT]generic_viterbi.c2026-05-07 16:02 27K 
[ ]generic_viterbi.o2026-05-07 16:02 9.3K 
[ ]generic_viterbi_utest2026-05-07 15:56 487K 
[TXT]generic_vtrace.c2026-05-07 16:02 11K 
[ ]generic_vtrace.o2026-05-07 16:02 7.3K 
[TXT]h2_io.c2026-05-07 16:02 12K 
[ ]h2_io.o2026-05-07 16:02 11K 
[TXT]heatmap.c2026-05-07 16:02 3.5K 
[ ]heatmap.o2026-05-07 16:02 5.1K 
[ ]hmmalign2026-05-07 15:56 784K 
[TXT]hmmalign.c2026-05-07 16:02 12K 
[ ]hmmalign.o2026-05-07 16:02 15K 
[ ]hmmbuild2026-05-07 15:55 909K 
[TXT]hmmbuild.c2026-05-07 16:00 64K 
[ ]hmmbuild.o2026-05-07 16:00 47K 
[ ]hmmc22026-05-07 15:56 749K 
[TXT]hmmc2.c2026-05-07 16:02 30K 
[ ]hmmc2.o2026-05-07 16:02 24K 
[ ]hmmconvert2026-05-07 15:56 500K 
[TXT]hmmconvert.c2026-05-07 16:02 3.5K 
[ ]hmmconvert.o2026-05-07 16:02 5.8K 
[TXT]hmmd_search_status.c2026-05-07 16:02 13K 
[ ]hmmd_search_status.o2026-05-07 16:02 3.1K 
[ ]hmmd_search_status_utest2026-05-07 15:56 69K 
[TXT]hmmdmstr.c2026-05-07 16:00 59K 
[ ]hmmdmstr.o2026-05-07 16:00 45K 
[TXT]hmmdmstr_shard.c2026-05-07 16:00 62K 
[ ]hmmdmstr_shard.o2026-05-07 16:00 46K 
[TXT]hmmdutils.c2026-05-07 16:02 13K 
[ ]hmmdutils.o2026-05-07 16:02 15K 
[TXT]hmmdwrkr.c2026-05-07 16:02 27K 
[ ]hmmdwrkr.o2026-05-07 16:02 23K 
[TXT]hmmdwrkr_shard.c2026-05-07 16:02 29K 
[ ]hmmdwrkr_shard.o2026-05-07 16:02 23K 
[ ]hmmemit2026-05-07 15:56 784K 
[TXT]hmmemit.c2026-05-07 16:02 13K 
[ ]hmmemit.o2026-05-07 16:02 18K 
[TXT]hmmer.c2026-05-07 16:02 8.1K 
[TXT]hmmer.h2026-05-07 15:56 88K 
[ ]hmmer.o2026-05-07 16:02 4.7K 
[ ]hmmer_utest2026-05-07 15:56 90K 
[ ]hmmerfm-exactmatch2026-05-07 15:56 181K 
[TXT]hmmerfm-exactmatch.c2026-05-07 16:02 19K 
[ ]hmmerfm-exactmatch.o2026-05-07 16:02 18K 
[ ]hmmfetch2026-05-07 15:56 505K 
[TXT]hmmfetch.c2026-05-07 16:02 13K 
[ ]hmmfetch.o2026-05-07 16:02 16K 
[ ]hmmlogo2026-05-07 15:56 500K 
[TXT]hmmlogo.c2026-05-07 16:02 10K 
[ ]hmmlogo.o2026-05-07 16:02 12K 
[ ]hmmpgmd2026-05-07 15:55 1.1M 
[TXT]hmmpgmd.c2026-05-07 16:02 8.1K 
[TXT]hmmpgmd.h2026-05-07 16:02 7.2K 
[ ]hmmpgmd.o2026-05-07 16:02 9.1K 
[TXT]hmmpgmd2msa.c2026-05-07 16:02 20K 
[ ]hmmpgmd2msa.o2026-05-07 16:02 9.0K 
[ ]hmmpgmd2msa_utest2026-05-07 15:56 774K 
[TXT]hmmpgmd_client_example.pl2026-05-07 16:02 20K 
[ ]hmmpgmd_shard2026-05-07 15:55 1.2M 
[TXT]hmmpgmd_shard.c2026-05-07 16:02 8.3K 
[TXT]hmmpgmd_shard.h2026-05-07 16:02 2.2K 
[ ]hmmpgmd_shard.o2026-05-07 16:02 9.4K 
[ ]hmmpress2026-05-07 15:56 512K 
[TXT]hmmpress.c2026-05-07 16:02 10K 
[TXT]hmmpress.itest.pl2026-05-07 16:02 2.2K 
[ ]hmmpress.o2026-05-07 16:02 12K 
[ ]hmmscan2026-05-07 15:55 963K 
[TXT]hmmscan.c2026-05-07 16:00 58K 
[ ]hmmscan.o2026-05-07 16:02 37K 
[ ]hmmsearch2026-05-07 15:55 963K 
[TXT]hmmsearch.c2026-05-07 16:00 64K 
[ ]hmmsearch.o2026-05-07 16:00 41K 
[ ]hmmsim2026-05-07 15:56 541K 
[TXT]hmmsim.c2026-05-07 16:02 40K 
[ ]hmmsim.o2026-05-07 16:02 32K 
[ ]hmmstat2026-05-07 15:56 496K 
[TXT]hmmstat.c2026-05-07 16:02 4.3K 
[ ]hmmstat.o2026-05-07 16:02 7.5K 
[DIR]impl_neon/2026-05-07 16:23 -  
[DIR]impl_sse/2026-05-07 16:23 -  
[DIR]impl_vmx/2026-05-07 16:23 -  
[ ]itest_brute2026-05-07 15:56 512K 
[TXT]itest_brute.c2026-05-07 16:02 25K 
[ ]itest_brute.o2026-05-07 16:02 21K 
[ ]jackhmmer2026-05-07 15:55 1.1M 
[TXT]jackhmmer.c2026-05-07 15:56 90K 
[ ]jackhmmer.o2026-05-07 16:00 62K 
[ ]libhmmer-src.stamp2026-05-07 16:02 57  
[TXT]libhmmer.a2026-05-07 15:55 1.1M 
[TXT]logsum.c2026-05-07 16:02 14K 
[ ]logsum.o2026-05-07 16:02 2.8K 
[ ]logsum_utest2026-05-07 15:56 77K 
[ ]makehmmerdb2026-05-07 15:56 516K 
[TXT]makehmmerdb.c2026-05-07 16:02 37K 
[ ]makehmmerdb.o2026-05-07 16:02 36K 
[TXT]modelconfig.c2026-05-07 16:00 47K 
[ ]modelconfig.o2026-05-07 16:02 7.8K 
[ ]modelconfig_utest2026-05-07 15:56 198K 
[TXT]modelstats.c2026-05-07 16:02 8.4K 
[ ]modelstats.o2026-05-07 16:02 7.6K 
[TXT]mpisupport.c2026-05-07 15:56 87K 
[ ]mpisupport.o2026-05-07 16:02 1.2K 
[ ]nhmmer2026-05-07 15:55 1.1M 
[TXT]nhmmer.c2026-05-07 15:56 88K 
[ ]nhmmer.o2026-05-07 15:56 78K 
[ ]nhmmscan2026-05-07 15:55 967K 
[TXT]nhmmscan.c2026-05-07 16:00 43K 
[ ]nhmmscan.o2026-05-07 16:00 45K 
[TXT]p7_alidisplay.c2026-05-07 15:56 85K 
[ ]p7_alidisplay.o2026-05-07 16:02 37K 
[ ]p7_alidisplay_utest2026-05-07 15:56 284K 
[TXT]p7_bg.c2026-05-07 16:02 26K 
[ ]p7_bg.o2026-05-07 16:02 11K 
[ ]p7_bg_utest2026-05-07 15:56 173K 
[TXT]p7_builder.c2026-05-07 16:00 42K 
[ ]p7_builder.o2026-05-07 16:02 24K 
[TXT]p7_config.h2026-05-07 16:02 4.7K 
[TXT]p7_config.h.in2026-05-07 16:02 4.6K 
[TXT]p7_domain.c2026-05-07 16:02 27K 
[ ]p7_domain.o2026-05-07 16:02 9.3K 
[ ]p7_domain_utest2026-05-07 15:56 266K 
[TXT]p7_domaindef.c2026-05-07 16:00 47K 
[ ]p7_domaindef.o2026-05-07 16:02 16K 
[TXT]p7_gbands.c2026-05-07 16:02 5.1K 
[TXT]p7_gbands.h2026-05-07 16:02 854  
[ ]p7_gbands.o2026-05-07 16:02 5.8K 
[TXT]p7_gmx.c2026-05-07 16:02 17K 
[ ]p7_gmx.o2026-05-07 16:02 8.9K 
[ ]p7_gmx_utest2026-05-07 15:56 225K 
[TXT]p7_gmxb.c2026-05-07 16:02 3.8K 
[TXT]p7_gmxb.h2026-05-07 16:02 683  
[ ]p7_gmxb.o2026-05-07 16:02 7.7K 
[TXT]p7_gmxchk.c2026-05-07 16:02 28K 
[TXT]p7_gmxchk.h2026-05-07 16:02 8.1K 
[ ]p7_gmxchk.o2026-05-07 16:02 6.8K 
[ ]p7_gmxchk_utest2026-05-07 15:56 207K 
[TXT]p7_hit.c2026-05-07 16:02 33K 
[ ]p7_hit.o2026-05-07 16:02 13K 
[ ]p7_hit_utest2026-05-07 15:56 270K 
[TXT]p7_hmm.c2026-05-07 16:00 51K 
[ ]p7_hmm.o2026-05-07 16:02 29K 
[ ]p7_hmm_utest2026-05-07 15:56 245K 
[TXT]p7_hmmcache.c2026-05-07 16:02 6.8K 
[TXT]p7_hmmcache.h2026-05-07 16:02 904  
[ ]p7_hmmcache.o2026-05-07 16:02 4.5K 
[TXT]p7_hmmd_search_stats.c2026-05-07 16:02 25K 
[ ]p7_hmmd_search_stats.o2026-05-07 16:02 5.1K 
[ ]p7_hmmd_search_stats_utest2026-05-07 16:00 64K 
[TXT]p7_hmmfile.c2026-05-07 15:56 129K 
[ ]p7_hmmfile.o2026-05-07 15:56 79K 
[ ]p7_hmmfile_utest2026-05-07 15:56 495K 
[TXT]p7_hmmwindow.c2026-05-07 16:02 2.1K 
[ ]p7_hmmwindow.o2026-05-07 16:02 2.4K 
[TXT]p7_null3.c2026-05-07 16:02 12K 
[TXT]p7_pipeline.c2026-05-07 15:56 89K 
[ ]p7_pipeline.o2026-05-07 16:02 37K 
[TXT]p7_prior.c2026-05-07 16:02 13K 
[ ]p7_prior.o2026-05-07 16:02 11K 
[TXT]p7_profile.c2026-05-07 16:02 21K 
[ ]p7_profile.o2026-05-07 16:02 12K 
[ ]p7_profile_utest2026-05-07 15:56 199K 
[TXT]p7_scoredata.c2026-05-07 16:02 16K 
[ ]p7_scoredata.o2026-05-07 16:02 10K 
[ ]p7_scoredata_utest2026-05-07 15:56 227K 
[TXT]p7_spensemble.c2026-05-07 16:02 23K 
[ ]p7_spensemble.o2026-05-07 16:02 9.4K 
[TXT]p7_tophits.c2026-05-07 15:56 86K 
[ ]p7_tophits.o2026-05-07 16:00 61K 
[ ]p7_tophits_utest2026-05-07 15:56 716K 
[TXT]p7_trace.c2026-05-07 16:00 57K 
[ ]p7_trace.o2026-05-07 16:02 34K 
[ ]p7_trace_utest2026-05-07 15:56 559K 
[ ]phmmer2026-05-07 15:55 1.1M 
[TXT]phmmer.c2026-05-07 15:56 75K 
[ ]phmmer.o2026-05-07 16:00 48K 
[TXT]seqmodel.c2026-05-07 16:02 11K 
[ ]seqmodel.o2026-05-07 16:02 2.5K 
[ ]seqmodel_utest2026-05-07 15:56 729K 
[TXT]tracealign.c2026-05-07 16:00 49K 
[ ]tracealign.o2026-05-07 16:02 23K 
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